Category: Funding Trends

Revisiting the Dependence of Scientific Productivity and Impact on Funding Level

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A 2010 analysis by NIGMS and subsequent studies by others (Fortin and Currie, 2013; Gallo et al., 2014; Lauer et al., 2015; Doyle et al., 2015; Cook et al., 2015) have indicated that, on average, larger budgets and labs do not correspond to greater returns on our investment in fundamental science. We have discussed the topic here in A Shared Responsibility and in an iBiology talk Link to external website. In this updated analysis, we assessed measures of the recent productivity and scientific impact of NIGMS grantees as a function of their total NIH funding.

We identified the pool of principal investigators (PIs) who held at least one NIGMS P01 or R01-equivalent grant (R01, R23, R29, R37) in Fiscal Year 2010. We then determined each investigator’s total NIH funding from research project grants (RPGs) or center grants (P20, P30, P50, P60, PL1, U54) for Fiscal Years 2009 to 2011 and averaged it over this 3-year period. Because many center grants are not organized into discrete projects and cores, we associated the contact PI with the entire budget and all publications attributed to the grant. We applied the same methodology to P01s. Thus, all publications citing the support of the center or P01 grant were also attributed to the contact PI, preventing underrepresentation of their productivity relative to their funding levels. Figure 1 shows the distribution of PIs by funding level, with the number of PIs at each funding level shown above each bar.

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Distribution of NIGMS R01 Award Sizes

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We have published median and mean direct cost award amounts for R01 grants, but these statistical aggregates can mask variations present in our grant portfolio. In this analysis, we illuminate two major differences in R01 award size distributions: those between single-principal investigator (PI) and multiple-PI (MPI) grants and those between new and competing renewal grants. It is worth noting that the numbers are per award values rather than the total NIGMS support provided to investigators and that award size can also be influenced by NIH-wide policies and NIGMS-specific policies that promote the consideration of multiple factors in making funding decisions.

The first major distinction in NIGMS R01s exists between single-PI and MPI awards. NIH has allowed applications that identify more than one PI since Fiscal Year 2007. Many MPI applications request, and receive, larger amounts of funding than do typical single-PI applications. As shown in Figure 1, single-PI awards have a size peak in the range of $175,000-200,000 in direct costs (funds typically directly associated with the research project rather than overhead costs), while MPI awards tend to have larger budgets and a broader size distribution. MPI awards are, on average, approximately 25% larger for each additional PI (data not shown).

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P01 Outcomes Analysis

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As part of our program assessment process, we have analyzed NIGMS program project (P01) grants to improve our understanding of how their outcomes compare with those of other mechanisms.

The most recent NIGMS funding opportunity announcement for P01s states that individual projects “must be clearly interrelated and synergistic so that the research ideas, efforts, and outcomes of the program as a whole will offer a distinct advantage over pursuing the individual projects separately.” From this perspective, we sought to address three major questions:

  • Do P01s achieve synergies above and beyond a collection of separate grants?
  • How do the results from P01s compare with those from R01s?
  • Do certain fields of science need P01s more than others?

To address these questions, we analyzed the outcomes of P01 grants using several different metrics and compared these outcomes to those of two comparator groups: single-principal investigator (PI) R01s and multiple-PI R01s. Since P01s could be considered as a collection of single-PI R01s and one or more cores, we chose single-PI R01s as a comparator group. Because a major facet of P01s is their focus on using collaborative approaches to science, we also wanted to compare their outcomes to another collaboration-focused research grant: multiple-PI R01s. While structurally different from P01s, multiple-PI R01s allow for a comparison between two competing models of funding team science within the NIGMS portfolio.

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Application and Funding Trends

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The Consolidated Appropriations Act, 2016, provides funding for the Federal Government through September 30. NIGMS has a Fiscal Year 2016 appropriation of $2.512 billion, which is $140 million, or 5.9%, higher than it was in Fiscal Year 2015. With this opportunity to expand NIGMS support for fundamental biomedical research comes a responsibility to make carefully considered investments with taxpayer funds.

Application Trends

One of the most commonly cited metrics when discussing grants is success rate, calculated as the number of applications funded divided by the number of applications received. As shown in Figure 1, the success rate for NIGMS research project grants (RPGs) increased from 24.8% in Fiscal Year 2014 to 29.6% in Fiscal Year 2015. This was due to an increase in the number of funded competing RPGs as well as a decline in the number of competing RPG applications. In contrast, in Fiscal Year 2013, applications increased while awards decreased, leading to a notable decrease in success rate. Overall, we have seen a decrease in RPG applications over the last 2 years, a trend warranting additional investigation.

Figure 1. Number of NIGMS Competing RPG Applications, Funded Competing RPGs and Success Rates for RPGs, Fiscal Years 2004-2015. NIGMS RPG applications (blue circles, dashed line; left axis) decreased from Fiscal Years 2014 to 2015 to a 5-year low. Meanwhile, NIGMS-funded RPGs (green squares, solid line; left axis) increased in Fiscal Year 2015 to a level not seen since Fiscal Year 2007. As a result, the NIGMS RPG success rate (gray triangles, dotted line; right axis) was the second highest it has been in the past decade.
Figure 1. Number of NIGMS Competing RPG Applications, Funded Competing RPGs and Success Rates for RPGs, Fiscal Years 2004-2015. NIGMS RPG applications (blue circles, dashed line; left axis) decreased from Fiscal Years 2014 to 2015 to a 5-year low. Meanwhile, NIGMS-funded RPGs (green squares, solid line; left axis) increased in Fiscal Year 2015 to a level not seen since Fiscal Year 2007. As a result, the NIGMS RPG success rate (gray triangles, dotted line; right axis) was the second highest it has been in the past decade.
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Analysis of NIGMS Funding Rates for Early Stage Investigators and Non-Early Stage New Investigators

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NIH and NIGMS have policies to promote the successful entry of junior investigators into independent biomedical research careers. NIH classifies investigators who have not previously had a major NIH grant into two categories: new investigators (NIs) and early stage investigators (ESIs), a subset of NIs who are within 10 years of completing their terminal research degree or medical residency. The goal of these policies is to support R01-equivalent awards to both of these categories of investigators at success rates (the percentage of new Type 1 R01 applications that were funded) similar to those of established investigators (EIs) who submit new R01 applications.

Given that the NI and ESI policies have been in effect for some time, we wanted to update and extend an analysis of success rates by investigator status performed in 2010 to see if NIGMS has been able to meet these objectives. While we found that the success rates for all NIs were comparable to or greater than that of EIs, our new analysis also revealed that the subset of NIs who completed their terminal research degree at least 10 years ago (non-ES NIs) had consistently lower success rates in obtaining R01s relative to both ESIs and EIs.

We focused our analysis on NIGMS Type 1 R01 applications for Fiscal Years 2011-2014. Figure 1a shows the success rates for EIs and NIs. During the time period analyzed, success rates for both EIs and NIs were comparable. However, when the NIs are separated into ESIs and non-ES NIs, the data show a more nuanced result (Figure 1b). ESIs consistently had higher success rates than either EIs or non-ES NIs when applying for new R01s.

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Further Analysis of Renewal Rates for New and Established NIGMS Investigator Projects

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In an earlier blog post, I presented data on the first competing renewal rates of R01 projects that NIGMS awarded to new and established investigators. The analysis showed that no renewal application was submitted for a substantial percentage of projects—30% of new projects from new investigators and 45% of new projects from established investigators. This raises questions, such as those suggested by Feedback Loop readers, including:

  • Do projects for which no renewal is submitted generally have less productivity or scientific impact?
  • Are new projects awarded to established investigators more likely to represent the second or third award to that investigator?

I’ve tried to explore these questions in a further analysis.

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Improved Success Rate and Other Funding Trends in Fiscal Year 2014

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The Consolidated and Further Continuing Appropriations Act, 2015, provides funding for the Federal Government through September 30. NIGMS has a Fiscal Year 2015 appropriation of $2.372 billion, which is $13 million, or 0.5%, higher than it was in Fiscal Year 2014.

As I explained in an earlier post, we made a number of adjustments to our portfolio and funding policies last fiscal year in order to bolster our support for investigator-initiated research. Partly because of these changes, the success rate for research project grants (RPGs)—which are primarily R01s—was 25 percent in Fiscal Year 2014. This is 5 percentage points higher than it was in Fiscal Year 2013. Had we not made the funding policy changes, we predicted that the success rate would have remained flat at 20 percent.

Figure 1 shows the number of RPG applications we received and funded, as well as the corresponding success rates, for Fiscal Years 2002-2014.

Figure 1. Number of competing RPG applications assigned to NIGMS (blue line with diamonds, left axis) and number funded (red line with squares, left axis) for Fiscal Years 2002-2014. The success rate (number of applications funded divided by the total number of applications) is shown in the green line with triangles, right axis. Data: Tony Moore.
Figure 1. Number of competing RPG applications assigned to NIGMS (blue line with diamonds, left axis) and number funded (red line with squares, left axis) for Fiscal Years 2002-2014. The success rate (number of applications funded divided by the total number of applications) is shown in the green line with triangles, right axis. Data: Tony Moore.

Moving forward, it will be important to employ strategies that will enable us to at least maintain this success rate. In keeping with this goal, we recently released a financial management plan (no longer available) that continues many of the funding policies we instituted last year. As funds from the retirement of the Protein Structure Initiative come back into the investigator-initiated RPG pool, we’ll be working to ensure that they support a sustained improvement in success rate rather than create a 1-year spike followed by a return to lower rates.

Figures 2 and 3 show data for funding versus the percentile scores of the R01 applications we received. People frequently ask me what NIGMS’ percentile cutoff or “payline” is, but it should be clear from these figures that we do not use a strict percentile score criterion for making funding decisions. Rather, we take a variety of factors into account in addition to the score, including the amount of other support already available to the researcher; the priority of the research area for the Institute’s mission; and the importance of maintaining a broad and diverse portfolio of research topics, approaches and investigators.

Figure 2. Percentage of competing R01 applications funded by NIGMS as a function of percentile scores for Fiscal Years 2010-2014. For Fiscal Year 2014, the success rate for R01 applications was 25.7 percent, and the midpoint of the funding curve was at approximately the 22nd percentile. Data: Jim Deatherage.
Figure 2. Percentage of competing R01 applications funded by NIGMS as a function of percentile scores for Fiscal Years 2010-2014. For Fiscal Year 2014, the success rate for R01 applications was 25.7 percent, and the midpoint of the funding curve was at approximately the 22nd percentile. See more details about the data analysis for Figure 2. Data: Jim Deatherage.
Figure 3. Number of competing R01 applications (solid black bars) assigned to NIGMS and number funded (striped red bars) in Fiscal Year 2014 as a function of percentile scores. Data: Jim Deatherage.
Figure 3. Number of competing R01 applications (solid black bars) assigned to NIGMS and number funded (striped red bars) in Fiscal Year 2014 as a function of percentile scores. See more details about the data analysis for Figure 3. Data: Jim Deatherage.

It’s too early to say what the success rate will be for Fiscal Year 2015 because it can be influenced by a number of factors, as I described last year. However, we’re hopeful that by continuing to adjust our priorities and policies to focus on supporting a broad and diverse portfolio of investigators, we can reverse the trend of falling success rates seen in recent years.

Examining the First Competing Renewal Rates of New NIGMS Investigators

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The successful entry and retention of new investigators into biomedical research is a priority for us, and the renewal rate of this group’s first R01 research grants is an important indicator for this goal. Here are the results of an analysis I did of the first competing renewal rates for new and established investigators.

Figure 1 shows that the first competing renewal rate of new investigators’ first NIGMS R01 or R29 grants has declined over the past 10 years. This trend is similar to the one for overall NIGMS R01 application success rates.

Percent Funded by End of Project Period (approximate) 53% 2002, 53% 2003, 52% 2004, 45% 2005, 44% 2006, 43% 2007, 43% 2008, 38% 2009, 39% 2010, 35% 2011, 32% 2012
Figure 1. Percentage of new investigators’ R01 and R29 grants that were successfully renewed. The horizontal axis is the fiscal year in which the first project period ended. The vertical axis is the percentage of these projects that were successfully renewed at least once (regardless of whether the new or amended competing renewal application was funded) by the end of Fiscal Year 2014.

Figure 2 gives a more complete picture of the renewal history of new investigators’ NIGMS R01 and R29 projects. In addition to the renewal rate (also shown in Figure 1), it shows the percentage of projects for which at least one renewal application was submitted but was not successfully renewed as well as the percentage of projects for which no renewal application was submitted.

Renewal history at the end date of first project based on paid, not paid, and no application submitted (approximate). 2002 53% paid, 20% not paid, 27% no application. 2003 53% paid, 23% not paid, 24% no application. 2004 52% paid, 27% not paid, 21% no application. 2005 45% paid, 32% not paid, 23% no application. 2006 43% paid, 34% not paid, 23% no application. 2007 43% paid, 30% not paid, 27% no application. 2008 43% paid, 33% not paid, 24% no application. 2009 38% paid, 33% not paid, 29% no application. 2010 39% paid, 36% not paid, 25% no application. 2011 35% paid, 38% not paid, 27% no application. 2012 32% paid, 35% not paid, 33% no application.
Figure 2. Renewal history of new investigators’ R01 and R29 grants between Fiscal Years 2002-2012. The bottom section (green) shows successful renewals (paid), which are also shown in Figure 1; the middle section (red) shows grants for which renewal was attempted but was not successful (not paid); and the top section (blue) shows grants for which no renewal application was submitted (no app).

Figure 3 shows that success in renewing an NIGMS-funded R01 grant correlates positively with how long the grant has been active.

Percentage of Projects funded by grant years (approximate) 31% 1st renewals for grant years 4-6, 49% 2nd renewals for grant years 7-12, 54% for 3rd and greater renewals for grant years 12 or greater
Figure 3. Competing renewal rates for the first, second and third or more renewals of NIGMS R01 grants awarded between Fiscal Years 2004-2007 to new and established investigators.

Since first renewals have lower success rates than subsequent renewals, Figure 4 addresses whether new investigators seeking to renew their first R01 grants are competitive with established investigators who are renewing long-term and/or new projects. The figure shows that the renewal rate for all projects from established investigators, including new as well as long-term projects, is higher than the renewal rate of projects from new investigators (46 percent in the left column versus 36 percent in the right column). However, when focusing only on the first renewals of new projects (in the middle and right columns), new investigators are renewing at a higher rate than are established investigators (36 percent versus 30 percent).

Renewal history by percentage of projects FY2004-FY2007 by type of investigator (approximate). All renewals by established investigators 46% paid, 24% not paid, 30% no application. Renewals of new projects by established investigators 30% paid, 25% not paid, 45% no application. Renewals of new projects by new investigators, 36% paid, 35% not paid, 29% no application.
Figure 4. Renewal history of NIGMS R01 projects from new and established investigators that were initially funded by NIGMS between Fiscal Years 2004-2007.

Figure 5 shows the relative success of new and established investigators in renewing new projects as a function of the percentile score obtained on the initial award. As the “Paid” sections of the bars indicate, for each of the percentile groups, the overall renewal rate for new investigators’ new R01s was higher than that for established investigators’ new R01s.

Percentage of new and established investigators' projects renewed in relation to the percentile ranking of the original award (approximate). Percentile 0-9, new investigators 41% paid, 28% not paid, 31% no application. Percentile 0-9 established investigators, 34% paid, 22% not paid, 44% no application. Percentile 10-19, new investigators, 32% paid, 41% not paid, 27% no application. Percentile 10-19, established investigators 28% paid, 29% not paid, 43% no application. 20th percentile and greater, new investigators 41% funded, 36% not paid, 23% no application. 20th percentile and greater, established investigators 26% paid, 29% not paid, 45% no application.
Figure 5. Renewal history of NIGMS R01 projects from new and established investigators that were initially funded between Fiscal Years 2004-2007 in relation to the percentile ranking (0-9th, 10-19th, and 20th and higher percentiles) of the original award. The number of projects in each of the six categories analyzed from left (new investigators, 0-9th percentile) to right (established investigators, ≥20th percentile) are: 239, 328, 299, 347, 172 and 102.

Recognizing the importance of new investigators in sustaining the vitality of biomedical research, we give special consideration to applications from them, and in some cases, we fund these applications at percentiles beyond those for most established investigators. The data in Figure 5 supports this practice by showing that the renewal rates of new investigators whose original applications scored at or above the 20th percentile are about the same as, or higher than, those for new and established investigators whose original applications scored in the 0-9th percentile range.

More About This Analysis

This analysis includes Recovery Act projects and excludes withdrawn applications and multi-principal investigator grants.

Definitions
R01 projects: Research project grants.
R29 projects: First Independent Research Support and Transition (FIRST) awards, R01-type research project grants awarded to new investigators available from 1987 to 1998.
Renewal rate: Percentage of grants that were successfully renewed by the date of this analysis (end of Fiscal Year 2014), regardless of whether a new or amended competing renewal application was funded.
Grant year: Grant year in which the renewal R01 application was submitted.
New investigator: An individual who has not previously competed successfully as a program director/principal investigator for a substantial NIH independent research award (see http://grants.nih.gov/grants/glossary.htm#NewInvestigator).

More on My Shared Responsibility Post

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Thanks for all of the comments and discussion on my last post. There were many good points and ideas brought up, and these will be very useful as we consider additional policy changes at NIGMS and NIH. I hope these conversations will continue outside of NIH as well.

Several people asked about the current distribution of funding among NIGMS principal investigators (PIs). Here are a few relevant statistics:

  • In terms of the NIH research funding of NIGMS grantees, in Fiscal Year 2013, 5 percent of the PIs had 25 percent of this group’s total NIH direct costs and 20 percent of the PIs had half of it. A similar pattern was recapitulated NIH-wide.
  • NIGMS PIs who had over $500,000 in total NIH direct costs held approximately $400 million in NIGMS funding.
  • The figure below shows the distribution of total NIH direct costs for NIGMS-supported investigators as well as the average number of NIH research grants held by PIs in each range.
Graph representing distribution of NIGMS investigartors' total NIH direct costs for research in FY2013
Figure 1. The distribution of NIGMS investigators’ total NIH direct costs for research in Fiscal Year 2013 (blue bars, left axis). The number below each bar represents the top of the direct cost range for that bin. The average number of NIH research grants held by PIs in each group is also shown (red line with squares, right axis). The direct costs bin ranges were chosen so that the first four bins each included 20 percent of NIGMS investigators.

With regard to changes NIH might make to help re-optimize the biomedical research ecosystem, NIH Director Francis Collins recently formed two NIH-wide working groups to develop possible new policies and programs related to some of the issues that I highlighted in my blog post and that were discussed in the subsequent comments. The first group, chaired by NIH Deputy Director for Extramural Research Sally Rockey, will explore ways to decrease the age at which investigators reach independence in research. The second, chaired by me, will look at developing more efficient and sustainable funding policies. Once these committees have made their recommendations, Sally plans to set up a group to consider the question of NIH support for faculty salaries.

As I mentioned in my post, we at NIGMS have been working for some time on these issues. We’ll be discussing additional changes and ideas with the community in the coming weeks and months on this blog and in other forums, including our upcoming Advisory Council meeting.

A Shared Responsibility

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The doubling of the NIH budget between 1998 and 2003 affected nearly every part of the biomedical research enterprise. The strategies we use to support research, the manner in which scientists conduct research, the ways in which researchers are evaluated and rewarded, and the organization of research institutions were all influenced by the large, sustained increases in funding during the doubling period.

Despite the fact that the budget doubling ended more than a decade ago, the biomedical research enterprise has not re-equilibrated to function optimally under the current circumstances. As has been pointed out by others (e.g., Ioannidis, 2011; Vale, 2012; Bourne, 2013; Alberts et al., 2014), the old models for supporting, evaluating, rewarding and organizing research are not well suited to today’s realities. Talented and productive investigators at all levels are struggling to keep their labs open (see Figure 1 below, Figure 3 in my previous post on factors affecting success rates and Figure 3 in Sally Rockey’s 2012 post on application numbers). Trainees are apprehensive about pursuing careers in research (Polka and Krukenberg, 2014). Study sections are discouraged by the fact that most of the excellent applications they review won’t be funded and by the difficulty of trying to prioritize among them. And the nation’s academic institutions and funding agencies struggle to find new financial models to continue to support research and graduate education. If we do not retool the system to become more efficient and sustainable, we will be doing a disservice to the country by depriving it of scientific advances that would have led to improvements in health and prosperity.

Re-optimizing the biomedical research enterprise will require significant changes in every part of the system. For example, despite prescient, early warnings from Bruce Alberts (1985) about the dangers of confusing the number of grants and the size of one’s research group with success, large labs and big budgets have come to be viewed by many researchers and institutions as key indicators of scientific achievement. However, when basic research labs get too big it creates a number of inefficiencies. Much of the problem is one of bandwidth: One person can effectively supervise, mentor and train a limited number of people. Furthermore, the larger a lab gets, the more time the principal investigator must devote to writing grants and performing administrative tasks, further reducing the time available for actually doing science.

Although certain kinds of research projects—particularly those with an applied outcome, such as clinical trials—can require large teams, a 2010 analysis by NIGMS and a number of subsequent studies of other funding systems (Fortin and Currie, 2013; Gallo et al., 2014) have shown that, on average, large budgets do not give us the best returns on our investments in basic science. In addition, because it is impossible to know in advance where the next breakthroughs will arise, having a broad and diverse research portfolio should maximize the number of important discoveries that emerge from the science we support (Lauer, 2014).

These and other lines of evidence indicate that funding smaller, more efficient research groups will increase the net impact of fundamental biomedical research: valuable scientific output per taxpayer dollar invested. But to achieve this increase, we must all be willing to share the responsibility and focus on efficiency as much as we have always focused on efficacy. In the current zero-sum funding environment, the tradeoffs are stark: If one investigator gets a third R01, it means that another productive scientist loses his only grant or a promising new investigator can’t get her lab off the ground. Which outcome should we choose?

My main motivation for writing this post is to ask the biomedical research community to think carefully about these issues. Researchers should ask: Can I do my work more efficiently? What size does my lab need to be? How much funding do I really need? How do I define success? What can I do to help the research enterprise thrive?

Academic institutions should ask: How should we evaluate, reward and support researchers? What changes can we make to enhance the efficiency and sustainability of the research enterprise?

And journals, professional societies and private funding organizations should examine the roles they can play in helping to rewire the unproductive incentive systems that encourage researchers to focus on getting more funding than they actually need.

We at NIGMS are working hard to find ways to address the challenges currently facing fundamental biomedical research. As just one example, our MIRA program aims to create a more efficient, stable, flexible and productive research funding mechanism. If it is successful, the program could become the Institute’s primary means of funding individual investigators and could help transform how we support fundamental biomedical research. But reshaping the system will require everyone involved to share the responsibility. We owe it to the next generation of researchers and to the American public.

Graph representing NIGMS principal investigators (PIs) without NIH R01 funding between 200 and 2014.
Figure 1. The number of NIGMS principal investigators (PIs) without NIH R01 funding has increased over time. All NIGMS PIs are shown by the purple Xs (left axis). NIGMS PIs who were funded in each fiscal year are represented by the orange circles (left axis). PIs who had no NIH funding in a given fiscal year but had funding from NIGMS within the previous 8 years and were still actively applying for funding within the previous 4 years are shown by the green triangles (left axis); these unfunded PIs have made up an increasingly large percentage of all NIGMS PIs over the past decade (blue squares; right axis). Definitions: “PI” includes both contact PIs and PIs on multi-PI awards. This analysis includes only R01, R37 and R29 (“R01 equivalent”) grants and PIs. Other kinds of NIH grant support are not counted. An “NIGMS PI” is defined as a current or former NIGMS R01 PI who was either funded by NIGMS in the fiscal year shown or who was not NIH-funded in the fiscal year shown but was funded by NIGMS within the previous 8 years and applied for NIGMS funding within the previous 4 years. The latter criterion indicates that these PIs were still seeking funding for a substantial period of time after termination of their last NIH grant. Note that PIs who had lost NIGMS support but had active R01 support from another NIH institute or center are not counted as “NIGMS PIs” because they were still funded in that fiscal year. Also not counted as “NIGMS PIs” are inactive PIs, defined as PIs who were funded by NIGMS in the previous 8 years but who did not apply for NIGMS funding in the previous 4 years. Data analysis was performed by Lisa Dunbar and Jim Deatherage.

UPDATE: For additional details, read More on My Shared Responsibility Post.